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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015904592.1_cds_XP_016454739.1_48732
CDS Infomation

[gene=LOC107778927] [db_xref=GeneID:107778927] [protein=paladin-like] [partial=3'] [protein_id=XP_016454739.1] [location=complement(join(<26..120,972..1207,1478..1537,1628..1761,4711..4837,5297..5395,5490..5589,5704..5774,7320..7391,8442..8573,10440..10598))] [gbkey=CDS]
Sequence

ATGCGATCCATGTCGATACCTAAGGAGCCAGAGCAAGTGATGAAACGGAGAGATGGATCC
GTTTTGGGAAAGAAGACAATTCTCAAAAGTGACCATTTCCCTGGCTGCCAAAACAGACGC
TTATCCCCTCACATCGACGGTGCTCCTAATTATCGCAAGGCCGGCTCTTCGCATGTTCAT
GGTGTTGCTATTCCAACGGTTGAAGGTATCCAAAATGTTCTTGACCATATTGGAGCTCAA
CTGAGTGGGAAGAAAACACACTTTCTCTGGATTAATCTCCGTGAGGAACCGGTGATATAT
ATAAATGGACGCCCGTTTGTCTTGCGTGAAGTAGAAAGGCCTTTCTCAAATCTCGAGTAT
ACGGGAATTAACAGGAAAAGGGTAGAGCAAATGGAGGATCGCTTGAAAGAAGATGTTCTG
CTAGAAGCTGCAAGATATGGAAATAAGATCCTTGTAACTGATGAGCTTCCTGATGGTCAG
ATGGTGGATCAATGGGAACCAGTAACATCTGATTCTGTGAAAACACCCTTACAGGTGTAT
GAGGAACTGCAAGCACAAGAGTACCTTGTTGACTACGAGCGAGTTCCTATTACTGACGAA
AAATCACCCAAAGAGCTGGATTTTGATATTCTTGTTCTTAGAGTTTCTCAAGCTGATGTG
AACACACAGATTATTTTTAATTGCCAAATGGGACGTGGGCGAACAACCACAGGAATGGTG
ATTTCCACATTGGTGTACCTCAATCGTATAGGGGCCTCTGGAATTCCAAGGAGCAATTCC
ATTGGTAGAGTTTCCGACTGTGTCTCCAATCTGAATGATACATTACCAAACTCAGAGGAG
GCAATCCGTAGAGGGGAATATGCTGTAATTAGAAGCTTGATTCGGGTATTAGAGGGTGGT
GTTGAAGGCAAAAGACAAGTGGATAAAGTCATTGACAAATGTTCCTCTATGCAGAACTTA
CGTGAAGCTATTGCTATCTACCGCAATAGTATTTTGCGCCAACCTGATGAGATGAAGAGA
GAGGCTGCACTTTCGTTTTTTGTGGAGTACCTAGAAAGATATTACTTCCTTATATGTTTT
GCTGTATATCTCCATACACAACGAGATGCACTATTTTCTAGGTCCTCTGCACAGTGCAGC
TTTAGTGATTGGATGAAAGCAAGACCAGAGTTGTATAGTATAATCCGTCGCACACTTGTA
TGGGCTCCAGTGGGATGCTGCTTTACTGGAAAAGCCCAAAGGAATCCTGCATTATTGGAA
ACTTATTTGCTAGATTTGGCTGCAG

Peptide Sequence

PEP ID

XP_016454739.1
PEP Infomation

PREDICTED: paladin-like, partial [Nicotiana tabacum]
Sequence

MRSMSIPKEPEQVMKRRDGSVLGKKTILKSDHFPGCQNRRLSPHIDGAPNYRKAGSSHVH
GVAIPTVEGIQNVLDHIGAQLSGKKTHFLWINLREEPVIYINGRPFVLREVERPFSNLEY
TGINRKRVEQMEDRLKEDVLLEAARYGNKILVTDELPDGQMVDQWEPVTSDSVKTPLQVY
EELQAQEYLVDYERVPITDEKSPKELDFDILVLRVSQADVNTQIIFNCQMGRGRTTTGMV
ISTLVYLNRIGASGIPRSNSIGRVSDCVSNLNDTLPNSEEAIRRGEYAVIRSLIRVLEGG
VEGKRQVDKVIDKCSSMQNLREAIAIYRNSILRQPDEMKREAALSFFVEYLERYYFLICF
AVYLHTQRDALFSRSSAQCSFSDWMKARPELYSIIRRTLVWAPVGCCFTGKAQRNPALLE
TYLLDLAA

Transcript Sequence

Gene sequence data has not been registered.